Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16300 and 16301 are separated by 287 nucleotides16301 and 16302 are separated by 461 nucleotides16302 and 16303 are separated by 774 nucleotides16303 and 16304 are separated by 383 nucleotides mRNA_7932: 16300 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 47,221 to 48,247 16300 mRNA_7933: 16301 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 48,535 to 49,423 16301 mRNA_7934: 16302 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 49,885 to 50,735 16302 mRNA_7935: 16303 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 51,510 to 51,923 16303 mRNA_7936: 16304 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 52,307 to 53,072 16304
Group Condition mRNA_7932 mRNA_7933 mRNA_7934 mRNA_7935 mRNA_7936
16300 16301 16302 16303 16304
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -1.0 N.D. -0.9
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.3 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 -0.2 N.D. +0.0
growth on ypd YPD +0.1 -0.1 +0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 -0.0 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 +0.2 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 +0.0 N.D. +0.2
auxotrophy YNB Glucose +0.4 +0.1 +0.4 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.1 +0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 +0.2 -0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 +0.4 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.2 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.3 -0.0 N.D. -0.1
growth on oleic acid YNB Glucose +0.3 +0.2 +0.2 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.4 -0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.0 -0.1 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.4 +0.4 -0.0 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +0.3 -0.2 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.0 +0.2 -0.1 N.D. -0.1
auxotrophy Dropout Complete +0.5 +0.3 +0.4 N.D. -0.1
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