Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16301 and 16302 are separated by 461 nucleotides16302 and 16303 are separated by 774 nucleotides16303 and 16304 are separated by 383 nucleotides16304 and 16305 are separated by 456 nucleotides mRNA_7933: 16301 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 48,535 to 49,423 16301 mRNA_7934: 16302 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 49,885 to 50,735 16302 mRNA_7935: 16303 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 51,510 to 51,923 16303 mRNA_7936: 16304 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 52,307 to 53,072 16304 mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53,529 to 55,424 16305
Group Condition mRNA_7933 mRNA_7934 mRNA_7935 mRNA_7936 mRNA_7937
16301 16302 16303 16304 16305
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.0 N.D. -0.9 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 N.D. +0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 N.D. +0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 N.D. -0.1 +0.1
growth on ypd YPD -0.1 +0.0 N.D. -0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 N.D. -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 N.D. +0.0 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 N.D. +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.0 N.D. +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.0 N.D. +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.2 N.D. +0.3 +0.3
auxotrophy YNB Glucose +0.1 +0.4 N.D. -0.2 +0.5
growth on oleic acid YNB Oleic Acid +0.1 +0.3 N.D. +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.4 N.D. -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. -0.0 +0.4
growth on oleic acid YNB Glucose +0.2 +0.2 N.D. +0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.4 -0.0 N.D. +0.2 +0.4
auxotrophy Dropout Complete +0.3 +0.4 N.D. -0.1 +0.5
remove
mRNA_7933
plot
remove
mRNA_7934
plot
remove
mRNA_7935
remove
mRNA_7936
plot
remove
mRNA_7937
plot