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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16304 and 16305 are separated by 456 nucleotides
16305 and 16306 are separated by 451 nucleotides
16306 and 16307 are separated by 204 nucleotides
16307 and 16308 are separated by 455 nucleotides
mRNA_7936: 16304 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 52,307 to 53,072
16304
mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53,529 to 55,424
16305
mRNA_7938: 16306 - Hypothetical Protein, at 55,876 to 58,183
16306
mRNA_7939: 16307 - Hypothetical Protein, at 58,388 to 59,651
16307
mRNA_7940: 16308 - Hypothetical Protein, at 60,107 to 61,381
16308
Group
Condition
mRNA
_7936
mRNA
_7937
mRNA
_7938
mRNA
_7939
mRNA
_7940
16304
16305
16306
16307
16308
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.2
-0.7
+0.3
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.2
-0.4
-0.5
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
+0.0
-0.1
+0.1
growth on ypd
YPD
-0.2
+0.1
-0.3
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.3
+0.3
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.4
-0.2
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
-0.2
+0.5
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
-0.1
+0.1
-0.1
auxotrophy
Dropout Complete
-0.1
+0.5
-0.0
-0.2
-0.0
auxotrophy
YNB Glucose
-0.2
+0.5
-0.1
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.4
-0.2
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.3
-0.2
+0.6
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.2
+0.2
-0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.0
+0.0
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.0
+0.0
+0.5
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.2
+0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
+0.2
+0.2
+0.1
growth on oleic acid
YNB Glucose
+0.2
+0.3
-0.2
-0.0
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.3
-0.3
+0.5
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
+0.0
+0.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
+0.4
-0.3
+0.6
+0.2
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