Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16308 and 16309 are separated by 241 nucleotides16309 and 16310 are separated by 157 nucleotides16310 and 16311 are separated by 405 nucleotides16311 and 16312 are separated by 382 nucleotides mRNA_7940: 16308 - Hypothetical Protein, at 60,107 to 61,381 16308 mRNA_7941: 16309 - Hypothetical Protein, at 61,623 to 61,945 16309 mRNA_7942: 16310 - K12824 TCERG1, CA150 transcription elongation regulator 1, at 62,103 to 65,141 16310 mRNA_7943: 16311 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 65,547 to 69,135 16311 mRNA_7944: 16312 - Hypothetical Protein, at 69,518 to 70,390 16312
Group Condition mRNA_7940 mRNA_7941 mRNA_7942 mRNA_7943 mRNA_7944
16308 16309 16310 16311 16312
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.2 -0.2 -0.7 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.4 -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.4 -0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 -0.6 +0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 +0.0 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 -0.5 -0.0 +0.2
auxotrophy Dropout Complete -0.0 -0.1 +0.2 -0.4 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.3 -0.5 +0.2
growth on ypd YPD +0.1 +0.3 -0.5 +0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.4 +0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.2 -0.2 +0.1
auxotrophy YNB Glucose +0.2 -0.0 +0.1 -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.3 -0.2 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 +0.2 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.7 -0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 -0.7 +0.2 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 -0.0 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 +0.2 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.3 +0.0 +0.7
growth on oleic acid YNB Oleic Acid +0.3 -0.0 -0.0 +0.2 +0.3
growth on oleic acid YNB Glucose +0.5 +0.3 +0.2 +0.1 +0.2
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