Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16309 and 16310 are separated by 157 nucleotides16310 and 16311 are separated by 405 nucleotides16311 and 16312 are separated by 382 nucleotides16312 and 16313 are separated by 239 nucleotides mRNA_7941: 16309 - Hypothetical Protein, at 61,623 to 61,945 16309 mRNA_7942: 16310 - K12824 TCERG1, CA150 transcription elongation regulator 1, at 62,103 to 65,141 16310 mRNA_7943: 16311 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 65,547 to 69,135 16311 mRNA_7944: 16312 - Hypothetical Protein, at 69,518 to 70,390 16312 mRNA_7945: 16313 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 70,630 to 71,509 16313
Group Condition mRNA_7941 mRNA_7942 mRNA_7943 mRNA_7944 mRNA_7945
16309 16310 16311 16312 16313
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 -0.7 -0.4 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 -0.1 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.5 -0.0 +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 -0.4 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.6 +0.2 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.2 +0.1 +0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.1 +0.1 -0.0
auxotrophy YNB Glucose -0.0 +0.1 -0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.7 +0.2 +0.8 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.7 -0.2 -0.2 -0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.4 +0.1 +0.1 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 -0.5 +0.2 +0.2
growth on ypd YPD +0.3 -0.5 +0.0 +0.2 +0.4
auxotrophy Dropout Complete -0.1 +0.2 -0.4 +0.5 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 -0.2 +0.1 +0.4
growth on oleic acid YNB Oleic Acid -0.0 -0.0 +0.2 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.3 +0.0 +0.7 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.2 +0.2 +0.5 +0.3
growth on oleic acid YNB Glucose +0.3 +0.2 +0.1 +0.2 +0.3
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