Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16310 and 16311 are separated by 405 nucleotides16311 and 16312 are separated by 382 nucleotides16312 and 16313 are separated by 239 nucleotides16313 and 16314 are separated by 423 nucleotides mRNA_7942: 16310 - K12824 TCERG1, CA150 transcription elongation regulator 1, at 62,103 to 65,141 16310 mRNA_7943: 16311 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 65,547 to 69,135 16311 mRNA_7944: 16312 - Hypothetical Protein, at 69,518 to 70,390 16312 mRNA_7945: 16313 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 70,630 to 71,509 16313 mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71,933 to 72,812 16314
Group Condition mRNA_7942 mRNA_7943 mRNA_7944 mRNA_7945 mRNA_7946
16310 16311 16312 16313 16314
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.7 -0.4 -1.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.0 +0.2 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 +0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 +0.0 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.2 +0.3 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.4 +0.2 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.1 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 -0.1 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.5 +0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 +0.2 +0.8 -0.3 +0.3
auxotrophy YNB Glucose +0.1 -0.3 +0.3 +0.2 +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.1 +0.3 -0.3
growth on ypd YPD -0.5 +0.0 +0.2 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 +0.7 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 +0.1 +0.4 +0.1
auxotrophy Dropout Complete +0.2 -0.4 +0.5 +0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 +0.2 -0.1 +0.5
growth on oleic acid YNB Oleic Acid -0.0 +0.2 +0.3 +0.2 +0.1
growth on oleic acid YNB Glucose +0.2 +0.1 +0.2 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.2 +0.5 +0.3 +0.1
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