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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16312 and 16313 are separated by 239 nucleotides
16313 and 16314 are separated by 423 nucleotides
16314 and 16315 are separated by 435 nucleotides
16315 and 16316 are separated by 329 nucleotides
mRNA_7944: 16312 - Hypothetical Protein, at 69,518 to 70,390
16312
mRNA_7945: 16313 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 70,630 to 71,509
16313
mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71,933 to 72,812
16314
mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73,248 to 74,114
16315
mRNA_7948: 16316 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 74,444 to 75,195
16316
Group
Condition
mRNA
_7944
mRNA
_7945
mRNA
_7946
mRNA
_7947
mRNA
_7948
16312
16313
16314
16315
16316
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.1
-0.4
+0.3
+0.8
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.0
-0.2
-0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.3
-0.3
-0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
+0.2
+0.1
-0.4
growth on oleic acid
YNB Glucose
+0.2
+0.3
+0.1
+0.3
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.1
-0.1
+0.1
+0.2
auxotrophy
YNB Glucose
+0.3
+0.2
+0.1
+0.1
-0.5
growth on ypd
YPD
+0.2
+0.4
+0.3
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.2
+0.0
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.5
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
-0.1
+0.0
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.2
-0.1
-0.1
+0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
+0.1
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.4
+0.1
+0.3
-0.4
auxotrophy
Dropout Complete
+0.5
+0.4
-0.1
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
-0.3
+0.1
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.3
+0.1
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
+0.1
-0.0
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
+0.0
-0.1
+1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
-0.3
+0.3
-0.0
+1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.0
+0.0
+0.1
+1.2
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