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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16314 and 16315 are separated by 435 nucleotides
16315 and 16316 are separated by 329 nucleotides
16316 and 16317 are separated by 413 nucleotides
16317 and 16318 are separated by 506 nucleotides
mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71,933 to 72,812
16314
mRNA_7947: 16315 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 73,248 to 74,114
16315
mRNA_7948: 16316 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 74,444 to 75,195
16316
mRNA_7949: 16317 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 75,609 to 76,482
16317
mRNA_7950: 16318 - K04802 PCNA proliferating cell nuclear antigen, at 76,989 to 79,257
16318
Group
Condition
mRNA
_7946
mRNA
_7947
mRNA
_7948
mRNA
_7949
mRNA
_7950
16314
16315
16316
16317
16318
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.0
-0.2
-0.2
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.1
-0.4
+0.2
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.5
+0.1
+0.0
auxotrophy
Dropout Complete
-0.1
-0.0
-0.0
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.3
-0.4
-0.3
-0.3
growth on oleic acid
YNB Glucose
+0.1
+0.3
-0.9
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.0
-0.2
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
+0.1
+0.7
+0.3
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
+0.2
-0.1
-0.3
auxotrophy
YNB Glucose
+0.1
+0.1
-0.5
-0.3
+0.4
growth on ypd
YPD
+0.3
-0.1
-0.5
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
+0.0
-0.2
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
+0.5
+0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
+0.2
+0.2
+0.5
growth on oleic acid
YNB Oleic Acid
+0.1
-0.0
+0.6
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.8
+0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.4
+0.2
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
+1.3
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
+1.2
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.0
+1.1
+0.1
+1.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.3
+0.8
-0.1
+2.4
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