Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16319 and 16320 are separated by 251 nucleotides16320 and 16321 are separated by 1033 nucleotides16321 and 16322 are separated by 544 nucleotides16322 and 16323 are separated by 434 nucleotides mRNA_7951: 16319 - K09527 DNAJC7 DnaJ homolog subfamily C member 7, at 79,808 to 82,314 16319 mRNA_7952: 16320 - KOG0627 Heat shock transcription factor, at 82,566 to 84,687 16320 mRNA_7953: 16321 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 85,721 to 88,276 16321 mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88,821 to 92,965 16322 mRNA_7955: 16323 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 93,400 to 95,869 16323
Group Condition mRNA_7951 mRNA_7952 mRNA_7953 mRNA_7954 mRNA_7955
16319 16320 16321 16322 16323
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.1 -0.3 -1.0 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.0 +0.2 -0.2 -0.0
auxotrophy Dropout Complete +0.0 -0.3 +0.2 +0.0 -0.2
auxotrophy YNB Glucose +0.3 -0.6 +0.2 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 +0.2 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 +0.2 +0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 +0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.0 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 +0.2 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.0 -0.1 +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.3 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.1 -0.1 +0.2
growth on oleic acid YNB Glucose -0.1 +0.2 +0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.2 +0.3 -0.2 +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.0 +0.2 -0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 +0.1 +0.4 +0.2
growth on ypd YPD +0.6 +0.1 +0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.2 +0.5 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 +0.5 +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.1 +0.4 +0.2 +0.3
remove
mRNA_7951
plot
remove
mRNA_7952
plot
remove
mRNA_7953
remove
mRNA_7954
plot
remove
mRNA_7955
plot