Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16328 and 16329 are separated by 199 nucleotides16329 and 16330 are separated by 519 nucleotides16330 and 16331 are separated by 257 nucleotides16331 and 16332 are separated by 423 nucleotides mRNA_7960: 16328 - SUPERFAMILY--SSF144232, at 102,805 to 103,919 16328 mRNA_7961: 16329 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 104,119 to 104,997 16329 mRNA_7962: 16330 - K08967 mtnD, mtnZ, ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, at 105,517 to 106,511 16330 mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106,769 to 107,651 16331 mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108,075 to 108,950 16332
Group Condition mRNA_7960 mRNA_7961 mRNA_7962 mRNA_7963 mRNA_7964
16328 16329 16330 16331 16332
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.7 -2.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 +0.0 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.1 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.1 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.1 +0.2 +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.4 -0.0 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 -0.2 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.2 +0.2 -0.0
auxotrophy YNB Glucose +0.1 -0.1 +0.2 +0.1 -0.0
auxotrophy Dropout Complete +0.1 -0.1 +0.3 -0.1 +0.0
growth on oleic acid YNB Glucose -0.1 +0.1 +0.1 +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.2 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.1 +0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.3 +0.1 +0.1 +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.4 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 +0.2 +0.1 -0.1
growth on ypd YPD +0.2 +0.1 +0.4 +0.6 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.8 +0.4 +0.1 -0.2
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