Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16329 and 16330 are separated by 519 nucleotides16330 and 16331 are separated by 257 nucleotides16331 and 16332 are separated by 423 nucleotides16332 and 16333 are separated by 427 nucleotides mRNA_7961: 16329 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 104,119 to 104,997 16329 mRNA_7962: 16330 - K08967 mtnD, mtnZ, ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, at 105,517 to 106,511 16330 mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106,769 to 107,651 16331 mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108,075 to 108,950 16332 mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109,378 to 110,240 16333
Group Condition mRNA_7961 mRNA_7962 mRNA_7963 mRNA_7964 mRNA_7965
16329 16330 16331 16332 16333
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 -2.2 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.0 -0.2 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.2 -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.1 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.3 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 +0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.2 -0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.0 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 +0.1 +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.2 +0.2 -0.0 +0.2
auxotrophy Dropout Complete -0.1 +0.3 -0.1 +0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.4 -0.1 +0.2 -0.1
auxotrophy YNB Glucose -0.1 +0.2 +0.1 -0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.1 -0.3 +0.2 +0.4
growth on oleic acid YNB Glucose +0.1 +0.1 +0.2 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 +0.1 +0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 +0.1 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.0 +0.2 +0.0 +0.2
growth on ypd YPD +0.1 +0.4 +0.6 +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 +0.4 +0.1 -0.2 +0.4
remove
mRNA_7961
plot
remove
mRNA_7962
plot
remove
mRNA_7963
remove
mRNA_7964
plot
remove
mRNA_7965
plot