Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16330 and 16331 are separated by 257 nucleotides
16331 and 16332 are separated by 423 nucleotides
16332 and 16333 are separated by 427 nucleotides
16333 and 16334 are separated by 440 nucleotides
mRNA_7962: 16330 - K08967 mtnD, mtnZ, ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, at 105,517 to 106,511
16330
mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106,769 to 107,651
16331
mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108,075 to 108,950
16332
mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109,378 to 110,240
16333
mRNA_7966: 16334 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 110,681 to 111,565
16334
Group
Condition
mRNA
_7962
mRNA
_7963
mRNA
_7964
mRNA
_7965
mRNA
_7966
16330
16331
16332
16333
16334
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-2.2
+0.1
-0.5
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.2
-0.5
-0.0
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.2
+0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.2
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.3
+0.0
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.0
-0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.2
-0.0
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
+0.1
+0.2
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.2
-0.0
+0.2
-0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
-0.0
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
+0.0
+0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.4
-0.1
+0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.1
-0.1
+0.3
-0.3
auxotrophy
Dropout Complete
+0.3
-0.1
+0.0
+0.3
-0.2
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.1
+0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
+0.2
+0.4
-0.0
auxotrophy
YNB Glucose
+0.2
+0.1
-0.0
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
+0.1
+0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.1
-0.2
+0.4
-0.1
growth on ypd
YPD
+0.4
+0.6
+0.0
-0.1
+0.1
remove
mRNA_7962
plot
remove
mRNA_7963
plot
remove
mRNA_7964
remove
mRNA_7965
plot
remove
mRNA_7966
plot