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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16331 and 16332 are separated by 423 nucleotides
16332 and 16333 are separated by 427 nucleotides
16333 and 16334 are separated by 440 nucleotides
16334 and 16335 are separated by 799 nucleotides
mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106,769 to 107,651
16331
mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108,075 to 108,950
16332
mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109,378 to 110,240
16333
mRNA_7966: 16334 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 110,681 to 111,565
16334
mRNA_7967: 16335 - Hypothetical Protein, at 112,365 to 112,943
16335
Group
Condition
mRNA
_7963
mRNA
_7964
mRNA
_7965
mRNA
_7966
mRNA
_7967
16331
16332
16333
16334
16335
ypd buoyancy
40 hrs No Buoyancy Separation
-2.2
+0.1
-0.5
+0.4
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.1
+0.1
+0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
+0.0
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.1
-0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.5
-0.0
+0.0
+0.4
growth on oleic acid
YNB Oleic Acid
+0.0
-0.0
-0.1
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.2
-0.1
-0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.1
+0.5
-0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
+0.2
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.0
+0.1
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.0
-0.1
-0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
+0.4
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
+0.4
-0.0
-0.1
growth on oleic acid
YNB Glucose
+0.2
+0.1
+0.1
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.0
+0.2
-0.3
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
+0.3
-0.3
+0.2
auxotrophy
YNB Glucose
+0.1
-0.0
+0.3
-0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.0
+0.2
-0.0
+0.1
auxotrophy
Dropout Complete
-0.1
+0.0
+0.3
-0.2
+0.5
growth on ypd
YPD
+0.6
+0.0
-0.1
+0.1
+0.3
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