Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16333 and 16334 are separated by 440 nucleotides
16334 and 16335 are separated by 799 nucleotides
16335 and 16336 are separated by 27 nucleotides
16336 and 16337 are separated by 455 nucleotides
mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109,378 to 110,240
16333
mRNA_7966: 16334 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 110,681 to 111,565
16334
mRNA_7967: 16335 - Hypothetical Protein, at 112,365 to 112,943
16335
mRNA_7968: 16336 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 112,971 to 114,201
16336
mRNA_7969: 16337 - Hypothetical Protein, at 114,657 to 115,244
16337
Group
Condition
mRNA
_7965
mRNA
_7966
mRNA
_7967
mRNA
_7968
mRNA
_7969
16333
16334
16335
16336
16337
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.3
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.4
+0.1
-0.2
-0.6
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
-0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.0
-0.1
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.1
-0.3
+0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.3
+0.0
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
+0.2
-0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.0
+0.1
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.2
-0.5
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.3
+0.1
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
+0.4
-0.0
-0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
-0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
+0.1
+0.3
-0.1
auxotrophy
YNB Glucose
+0.3
-0.2
+0.0
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.1
-0.4
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.1
+0.0
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.3
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.3
+0.2
+0.0
+0.2
growth on ypd
YPD
-0.1
+0.1
+0.3
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.0
+0.4
+0.1
+0.4
auxotrophy
Dropout Complete
+0.3
-0.2
+0.5
+0.1
+0.3
remove
mRNA_7965
plot
remove
mRNA_7966
plot
remove
mRNA_7967
remove
mRNA_7968
plot
remove
mRNA_7969
plot