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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16340 and 16341 are separated by 560 nucleotides
16341 and 16342 are separated by 262 nucleotides
16342 and 16343 are separated by 587 nucleotides
16343 and 16344 are separated by 405 nucleotides
mRNA_7972: 16340 - Hypothetical Protein, at 120,428 to 122,131
16340
mRNA_7973: 16341 - KOG3511 Sortilin and related receptors, at 122,692 to 128,410
16341
mRNA_7974: 16342 - Hypothetical Protein, at 128,673 to 129,137
16342
mRNA_7975: 16343 - KOG0762 Mitochondrial carrier protein, at 129,725 to 131,537
16343
mRNA_7976: 16344 - BLAST carbohydrate-binding module family 13 protein [Schizo..., at 131,943 to 133,643
16344
Group
Condition
mRNA
_7972
mRNA
_7973
mRNA
_7974
mRNA
_7975
mRNA
_7976
16340
16341
16342
16343
16344
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-1.4
+0.1
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.7
-0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
-0.8
+0.3
+0.1
auxotrophy
YNB Glucose
-0.1
-0.3
-0.5
-0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-1.2
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.3
-0.4
-0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
-0.3
-0.8
+0.2
auxotrophy
Dropout Complete
-0.0
-0.1
-0.4
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.3
-0.0
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.5
-0.1
-0.3
+0.4
growth on oleic acid
YNB Glucose
-0.0
-0.3
-0.1
-0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.5
-0.1
-0.2
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-1.0
+0.5
+0.6
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
-0.2
+0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.3
-0.2
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.8
+1.1
-0.6
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
+0.9
-0.8
+0.1
growth on ricinoleic acid
YNB Glucose
+0.2
-0.1
+0.3
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.7
+1.5
-1.0
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.4
+1.4
-0.5
+0.5
growth on ypd
YPD
-0.0
+0.2
+1.2
+0.0
+0.2
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