Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16341 and 16342 are separated by 262 nucleotides16342 and 16343 are separated by 587 nucleotides16343 and 16344 are separated by 405 nucleotides16344 and 16345 are separated by 590 nucleotides mRNA_7973: 16341 - KOG3511 Sortilin and related receptors, at 122,692 to 128,410 16341 mRNA_7974: 16342 - Hypothetical Protein, at 128,673 to 129,137 16342 mRNA_7975: 16343 - KOG0762 Mitochondrial carrier protein, at 129,725 to 131,537 16343 mRNA_7976: 16344 - BLAST carbohydrate-binding module family 13 protein [Schizo..., at 131,943 to 133,643 16344 mRNA_7977: 16345 - K17757 CARKD ATP-dependent NAD(P)H-hydrate dehydratase, at 134,234 to 135,920 16345
Group Condition mRNA_7973 mRNA_7974 mRNA_7975 mRNA_7976 mRNA_7977
16341 16342 16343 16344 16345
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 -0.8 +0.2 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 -0.2 +0.1 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.8 +0.3 +0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -1.4 +0.1 +0.1 -0.2 -0.1
growth on oleic acid YNB Glucose -0.3 -0.1 -0.4 +0.3 -1.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -1.2 -0.1 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 -0.3 -0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.5 -0.1 -0.3 +0.4 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.7 -0.1 -0.4 +0.5
auxotrophy YNB Glucose -0.3 -0.5 -0.2 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 +1.5 -1.0 +0.6 -0.9
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.1 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.0 -0.0 +0.2
auxotrophy Dropout Complete -0.1 -0.4 -0.1 +0.0 +0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.3 +0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +1.1 -0.6 +0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.2 +0.2 -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.0 +0.5 +0.6 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.9 -0.8 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +1.4 -0.5 +0.5 -0.2
growth on ypd YPD +0.2 +1.2 +0.0 +0.2 -0.1
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