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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16347 and 16348 are separated by 234 nucleotides
16348 and 16349 are separated by 383 nucleotides
16349 and 16350 are separated by 835 nucleotides
16350 and 16351 are separated by 421 nucleotides
mRNA_7979: 16347 - KOG0504 FOG Ankyrin repeat, at 137,884 to 138,763
16347
mRNA_7980: 16348 - KOG0550 Molecular chaperone (DnaJ superfamily), at 138,998 to 141,142
16348
mRNA_7981: 16349 - KOG2504 Monocarboxylate transporter, at 141,526 to 143,466
16349
mRNA_7982: 16350 - KOG2504 Monocarboxylate transporter, at 144,302 to 146,236
16350
mRNA_7983: 16351 - K11495 CENPA histone H3-like centromeric protein A, at 146,658 to 147,555
16351
Group
Condition
mRNA
_7979
mRNA
_7980
mRNA
_7981
mRNA
_7982
mRNA
_7983
16347
16348
16349
16350
16351
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.6
-0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.0
-0.9
+0.1
N.D.
auxotrophy
YNB Glucose
N.D.
-0.3
-0.6
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
-0.6
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.2
-0.3
-0.4
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.1
-0.2
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
-0.2
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
-0.4
+0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.2
+0.1
N.D.
growth on ypd
YPD
N.D.
+0.1
+0.1
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
-0.0
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.4
-0.4
+0.0
N.D.
auxotrophy
Dropout Complete
N.D.
+0.0
+0.0
+0.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.0
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.5
+0.4
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
+0.3
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.3
-0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
+0.3
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.1
+0.4
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
+0.4
-0.0
N.D.
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