Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16348 and 16349 are separated by 383 nucleotides16349 and 16350 are separated by 835 nucleotides16350 and 16351 are separated by 421 nucleotides16351 and 16352 are separated by 269 nucleotides mRNA_7980: 16348 - KOG0550 Molecular chaperone (DnaJ superfamily), at 138,998 to 141,142 16348 mRNA_7981: 16349 - KOG2504 Monocarboxylate transporter, at 141,526 to 143,466 16349 mRNA_7982: 16350 - KOG2504 Monocarboxylate transporter, at 144,302 to 146,236 16350 mRNA_7983: 16351 - K11495 CENPA histone H3-like centromeric protein A, at 146,658 to 147,555 16351 mRNA_7984: 16352 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 147,825 to 148,945 16352
Group Condition mRNA_7980 mRNA_7981 mRNA_7982 mRNA_7983 mRNA_7984
16348 16349 16350 16351 16352
growth on oleic acid YNB Oleic Acid -0.1 -0.6 -0.3 N.D. -0.4
auxotrophy YNB Glucose -0.3 -0.6 +0.1 N.D. -0.5
growth on oleic acid YNB Glucose -0.1 -0.2 -0.2 N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.9 +0.1 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.6 +0.0 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 -0.4 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 +0.0 N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.4 +0.1 N.D. -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.4 +0.0 N.D. -0.3
growth on ypd YPD +0.1 +0.1 -0.2 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 -0.1 N.D. +0.3
auxotrophy Dropout Complete +0.0 +0.0 +0.0 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 -0.1 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.3 -0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.1 -0.0 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 -0.0 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 -0.1 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.4 +0.3 N.D. +0.5
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