Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16350 and 16351 are separated by 421 nucleotides
16351 and 16352 are separated by 269 nucleotides
16352 and 16353 are separated by 147 nucleotides
16353 and 16354 are separated by 150 nucleotides
mRNA_7982: 16350 - KOG2504 Monocarboxylate transporter, at 144,302 to 146,236
16350
mRNA_7983: 16351 - K11495 CENPA histone H3-like centromeric protein A, at 146,658 to 147,555
16351
mRNA_7984: 16352 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 147,825 to 148,945
16352
mRNA_7985: 16353 - K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1, at 149,093 to 150,954
16353
mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151,105 to 154,451
16354
Group
Condition
mRNA
_7982
mRNA
_7983
mRNA
_7984
mRNA
_7985
mRNA
_7986
16350
16351
16352
16353
16354
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
N.D.
-0.1
-0.5
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
N.D.
+0.2
-0.5
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
-0.4
-0.1
+0.4
growth on oleic acid
YNB Glucose
-0.2
N.D.
-0.5
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.0
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.0
+0.2
-0.1
auxotrophy
YNB Glucose
+0.1
N.D.
-0.5
+0.2
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.3
-0.3
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.0
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
-0.3
+0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
+0.3
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.2
+0.1
-0.0
auxotrophy
Dropout Complete
+0.0
N.D.
+0.0
+0.1
-0.0
growth on ypd
YPD
-0.2
N.D.
-0.0
+0.4
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
-0.0
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.3
+0.3
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
+0.0
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
+0.1
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
+0.0
+0.6
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.5
-0.0
+0.0
remove
mRNA_7982
plot
remove
mRNA_7983
plot
remove
mRNA_7984
remove
mRNA_7985
plot
remove
mRNA_7986
plot