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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16351 and 16352 are separated by 269 nucleotides
16352 and 16353 are separated by 147 nucleotides
16353 and 16354 are separated by 150 nucleotides
16354 and 16355 are separated by 571 nucleotides
mRNA_7983: 16351 - K11495 CENPA histone H3-like centromeric protein A, at 146,658 to 147,555
16351
mRNA_7984: 16352 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 147,825 to 148,945
16352
mRNA_7985: 16353 - K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1, at 149,093 to 150,954
16353
mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151,105 to 154,451
16354
mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155,023 to 156,185
16355
Group
Condition
mRNA
_7983
mRNA
_7984
mRNA
_7985
mRNA
_7986
mRNA
_7987
16351
16352
16353
16354
16355
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
-0.5
-0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.0
+0.1
-0.4
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
-0.5
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
+0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
+0.2
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
+0.3
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
+0.4
+0.1
-0.6
growth on oleic acid
YNB Glucose
N.D.
-0.5
+0.2
+0.1
+0.1
auxotrophy
YNB Glucose
N.D.
-0.5
+0.2
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
-0.1
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.2
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
+0.0
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.0
+0.4
-0.0
-0.2
auxotrophy
Dropout Complete
N.D.
+0.0
+0.1
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
-0.3
+0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.3
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+0.6
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.3
-0.2
+0.1
+0.3
growth on ypd
YPD
N.D.
-0.0
+0.4
-0.0
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.5
-0.0
+0.0
+0.2
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