Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16352 and 16353 are separated by 147 nucleotides16353 and 16354 are separated by 150 nucleotides16354 and 16355 are separated by 571 nucleotides16355 and 16356 are separated by 292 nucleotides mRNA_7984: 16352 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 147,825 to 148,945 16352 mRNA_7985: 16353 - K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1, at 149,093 to 150,954 16353 mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151,105 to 154,451 16354 mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155,023 to 156,185 16355 mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156,478 to 157,308 16356
Group Condition mRNA_7984 mRNA_7985 mRNA_7986 mRNA_7987 mRNA_7988
16352 16353 16354 16355 16356
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.5 -0.0 -0.1 -0.2
auxotrophy YNB Glucose -0.5 +0.2 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.5 -0.2 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 -0.4 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.3 +0.0 -0.2 -0.1
auxotrophy Dropout Complete +0.0 +0.1 -0.0 +0.2 -0.5
growth on oleic acid YNB Glucose -0.5 +0.2 +0.1 +0.1 +0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.1 +0.1 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 +0.1 -0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.2 -0.0 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.3 +0.3 +0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.1 +0.4 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.0 +0.0 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.4 -0.0 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.6 +0.1 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.3 +0.0 +0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 +0.0 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.0 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 +0.1 +0.3 +0.0
growth on ypd YPD -0.0 +0.4 -0.0 +0.3 +0.1
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