Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16354 and 16355 are separated by 571 nucleotides16355 and 16356 are separated by 292 nucleotides16356 and 16357 are separated by 644 nucleotides16357 and 16358 are separated by 554 nucleotides mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151,105 to 154,451 16354 mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155,023 to 156,185 16355 mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156,478 to 157,308 16356 mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157,953 to 158,694 16357 mRNA_7990: 16358 - Hypothetical Protein, at 159,249 to 159,873 16358
Group Condition mRNA_7986 mRNA_7987 mRNA_7988 mRNA_7989 mRNA_7990
16354 16355 16356 16357 16358
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.2 -0.4 -1.5 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.2 +0.0 -0.0 -1.9
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 -0.2 +0.6 -1.6
auxotrophy Dropout Complete -0.0 +0.2 -0.5 -0.2 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 +0.1 -0.9 +0.2
auxotrophy YNB Glucose +0.1 +0.1 -0.3 +0.1 -0.9
growth on oleic acid YNB Glucose +0.1 +0.1 +0.0 -0.2 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.1 +0.0 -0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.0 +0.7 -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 +0.1 -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 +0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.1 +0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 -0.2 -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.3 +0.3 -0.3 +0.6
growth on oleic acid YNB Oleic Acid +0.4 +0.2 +0.2 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 -0.1 +0.7 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.6 +0.3 +0.8 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.2 +0.2 +0.1 +0.2
growth on ypd YPD -0.0 +0.3 +0.1 +0.0 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.2 +0.0 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.2 -0.1 +1.1 +0.1
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