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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16357 and 16358 are separated by 554 nucleotides
16358 and 16359 are separated by 1010 nucleotides
16359 and 16360 are separated by 512 nucleotides
16360 and 16361 are separated by 95 nucleotides
mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157,953 to 158,694
16357
mRNA_7990: 16358 - Hypothetical Protein, at 159,249 to 159,873
16358
mRNA_7991: 16359 - K02132 ATPeF1A, ATP5A1, ATP1 F-type H+-transporting ATPase subunit alpha, at 160,884 to 163,546
16359
mRNA_7992: 16360 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 164,059 to 164,941
16360
mRNA_7993: 16361 - Hypothetical Protein, at 165,037 to 166,382
16361
Group
Condition
mRNA
_7989
mRNA
_7990
mRNA
_7991
mRNA
_7992
mRNA
_7993
16357
16358
16359
16360
16361
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-1.9
N.D.
-1.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-1.5
-1.2
N.D.
+0.3
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-1.6
N.D.
-0.5
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.7
-1.4
N.D.
+0.0
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.7
N.D.
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+0.2
N.D.
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.5
N.D.
+0.1
+0.3
auxotrophy
YNB Glucose
+0.1
-0.9
N.D.
+0.4
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.4
N.D.
+0.4
+0.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.0
N.D.
+0.3
+0.1
auxotrophy
Dropout Complete
-0.2
-0.6
N.D.
+0.5
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.2
N.D.
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.3
+0.6
N.D.
+0.2
+0.0
growth on ypd
YPD
+0.0
+0.5
N.D.
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.1
+0.1
N.D.
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.1
N.D.
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
N.D.
+0.3
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.1
N.D.
+0.5
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.9
-0.2
N.D.
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
+0.1
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.1
N.D.
+0.8
-0.2
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