Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16358 and 16359 are separated by 1010 nucleotides16359 and 16360 are separated by 512 nucleotides16360 and 16361 are separated by 95 nucleotides16361 and 16362 are separated by 131 nucleotides mRNA_7990: 16358 - Hypothetical Protein, at 159,249 to 159,873 16358 mRNA_7991: 16359 - K02132 ATPeF1A, ATP5A1, ATP1 F-type H+-transporting ATPase subunit alpha, at 160,884 to 163,546 16359 mRNA_7992: 16360 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 164,059 to 164,941 16360 mRNA_7993: 16361 - Hypothetical Protein, at 165,037 to 166,382 16361 mRNA_7994: 16362 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 166,514 to 167,452 16362
Group Condition mRNA_7990 mRNA_7991 mRNA_7992 mRNA_7993 mRNA_7994
16358 16359 16360 16361 16362
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 N.D. -1.2 -0.5 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -1.6 N.D. -0.5 -0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -1.4 N.D. +0.0 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 N.D. +0.3 +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. +0.1 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.0 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.6 -0.1 +0.4
growth on oleic acid YNB Glucose -0.7 N.D. +0.3 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.2 -0.1 +0.0
auxotrophy YNB Glucose -0.9 N.D. +0.4 +0.2 +0.2
auxotrophy Dropout Complete -0.6 N.D. +0.5 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.3 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.4 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.8 -0.2 -0.3
growth on ypd YPD +0.5 N.D. -0.1 +0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.3 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.2 +0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.6 N.D. +0.2 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.2 -0.1 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.5 +0.3 +0.2
remove
mRNA_7990
plot
remove
mRNA_7991
plot
remove
mRNA_7992
remove
mRNA_7993
plot
remove
mRNA_7994
plot