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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16363 and 16364 are separated by 180 nucleotides
16364 and 16365 are separated by 274 nucleotides
16365 and 16366 are separated by 344 nucleotides
16366 and 16367 are separated by 134 nucleotides
mRNA_7995: 16363 - Hypothetical Protein, at 173,572 to 173,952
16363
mRNA_7996: 16364 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 174,133 to 175,085
16364
mRNA_7997: 16365 - Hypothetical Protein, at 175,360 to 176,282
16365
mRNA_7998: 16366 - KOG3156 Uncharacterized membrane protein, at 176,627 to 177,709
16366
mRNA_7999: 16367 - K10994 RAD9A cell cycle checkpoint control protein RAD9A, at 177,844 to 179,868
16367
Group
Condition
mRNA
_7995
mRNA
_7996
mRNA
_7997
mRNA
_7998
mRNA
_7999
16363
16364
16365
16366
16367
growth on oleic acid
YNB Glucose
-0.8
-0.0
-0.2
N.D.
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.4
-0.8
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.0
-0.4
N.D.
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.2
+0.2
N.D.
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.0
+0.1
N.D.
-1.7
auxotrophy
YNB Glucose
-0.2
+0.1
-0.5
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.2
-0.1
-0.4
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
+0.2
-0.2
N.D.
-0.3
growth on oleic acid
YNB Oleic Acid
-0.7
-0.1
+0.2
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
-0.2
N.D.
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.4
-0.5
N.D.
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
+0.2
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
+0.4
-0.5
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.1
+0.1
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
+0.3
N.D.
-0.4
growth on ricinoleic acid
YNB Glucose
-0.3
+0.5
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
+0.0
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.5
-0.1
-0.2
N.D.
+0.0
auxotrophy
Dropout Complete
+0.3
+0.3
+0.0
N.D.
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.3
+0.4
N.D.
-0.6
growth on ypd
YPD
+0.9
+0.2
-0.5
N.D.
+1.4
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