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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16367 and 16368 are separated by 217 nucleotides
16368 and 16369 are separated by 233 nucleotides
16369 and 16370 are separated by 509 nucleotides
16370 and 16371 are separated by 1721 nucleotides
mRNA_7999: 16367 - K10994 RAD9A cell cycle checkpoint control protein RAD9A, at 177,844 to 179,868
16367
mRNA_8000: 16368 - K08991 MUS81 crossover junction endonuclease MUS81, at 180,086 to 183,760
16368
mRNA_8001: 16369 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 183,994 to 185,593
16369
mRNA_8002: 16370 - KOG0132 RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains, at 186,103 to 188,392
16370
mRNA_8003: 16371 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 190,114 to 191,045
16371
Group
Condition
mRNA
_7999
mRNA
_8000
mRNA
_8001
mRNA
_8002
mRNA
_8003
16367
16368
16369
16370
16371
growth on oleic acid
YNB Glucose
-1.0
+0.0
-0.3
+0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.7
+0.3
+0.1
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.1
-0.7
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.6
+0.4
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.9
-0.1
-0.0
+0.0
+0.1
auxotrophy
YNB Glucose
-0.6
-0.1
-0.1
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.2
-0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.2
-0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.2
-0.0
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.3
-0.2
+0.7
-0.1
auxotrophy
Dropout Complete
-0.4
-0.0
+0.2
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.0
+0.1
-0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.0
-0.2
+0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.0
-0.3
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.0
+0.2
-0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
-0.0
+1.0
+0.5
-0.6
growth on ricinoleic acid
YNB Glucose
-0.1
+0.0
-0.1
+0.3
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.0
-0.1
+0.6
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.3
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
+0.3
+0.1
+0.2
growth on ypd
YPD
+1.4
+0.1
+0.1
+0.0
+0.1
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