Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16370 and 16371 are separated by 1721 nucleotides16371 and 16372 are separated by 254 nucleotides16372 and 16373 are separated by 823 nucleotides16373 and 16374 are separated by 1276 nucleotides mRNA_8002: 16370 - KOG0132 RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains, at 186,103 to 188,392 16370 mRNA_8003: 16371 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 190,114 to 191,045 16371 mRNA_8004: 16372 - K06648 SWI6 regulatory protein SWI6, at 191,300 to 193,753 16372 mRNA_8005: 16373 - BLAST alpha- -mannosyltransferase alg11p [Moniliophthor..., at 194,577 to 195,838 16373 mRNA_8006: 16374 - Hypothetical Protein, at 197,115 to 197,847 16374
Group Condition mRNA_8002 mRNA_8003 mRNA_8004 mRNA_8005 mRNA_8006
16370 16371 16372 16373 16374
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 N.D. -0.7 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.4 N.D. -0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.5 N.D. +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 N.D. +0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 N.D. +0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.4 N.D. -0.1 -0.4
auxotrophy Dropout Complete -0.2 +0.1 N.D. +0.1 -0.6
growth on oleic acid YNB Glucose +0.1 -0.3 N.D. -0.3 +0.1
auxotrophy YNB Glucose -0.3 +0.2 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. -0.7 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 N.D. -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.6 N.D. +0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.3 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.5 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.3 N.D. -0.6 +0.3
growth on oleic acid YNB Oleic Acid +0.6 -0.2 N.D. -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.2 N.D. +0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.1 N.D. +0.2 +0.0
growth on ypd YPD +0.0 +0.1 N.D. +0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.1 N.D. +0.2 +0.1
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