Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16371 and 16372 are separated by 254 nucleotides16372 and 16373 are separated by 823 nucleotides16373 and 16374 are separated by 1276 nucleotides16374 and 16375 are separated by 487 nucleotides mRNA_8003: 16371 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 190,114 to 191,045 16371 mRNA_8004: 16372 - K06648 SWI6 regulatory protein SWI6, at 191,300 to 193,753 16372 mRNA_8005: 16373 - BLAST alpha- -mannosyltransferase alg11p [Moniliophthor..., at 194,577 to 195,838 16373 mRNA_8006: 16374 - Hypothetical Protein, at 197,115 to 197,847 16374 mRNA_8007: 16375 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 198,335 to 201,051 16375
Group Condition mRNA_8003 mRNA_8004 mRNA_8005 mRNA_8006 mRNA_8007
16371 16372 16373 16374 16375
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.7 -0.4 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. -0.1 -0.4 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.2 +0.1 -1.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.2 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.6 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. +0.2 -0.4 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.2 -0.4 +0.6
growth on oleic acid YNB Glucose -0.3 N.D. -0.3 +0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.7 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 -0.6 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.6 +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 -0.5 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.5 +0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.3 +0.1 +0.7
auxotrophy YNB Glucose +0.2 N.D. -0.1 -0.1 +0.4
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.2 +0.0 +0.3
auxotrophy Dropout Complete +0.1 N.D. +0.1 -0.6 +0.8
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. -0.2 -0.1 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. +0.2 -0.3 +1.4
growth on ypd YPD +0.1 N.D. +0.4 +0.2 +0.1
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