Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16375 and 16376 are separated by 1580 nucleotides16376 and 16377 are separated by 469 nucleotides16377 and 16378 are separated by 577 nucleotides16378 and 16379 are separated by 384 nucleotides mRNA_8007: 16375 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 198,335 to 201,051 16375 mRNA_8008: 16376 - BLAST CAMK/CAMKL protein kinase [Microbotryum lychnidis-dio..., at 202,632 to 203,729 16376 mRNA_8009: 16377 - K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase, at 204,199 to 205,713 16377 mRNA_8010: 16378 - K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial, at 206,291 to 207,434 16378 mRNA_8011: 16379 - K09537 DNAJC17 DnaJ homolog subfamily C member 17, at 207,819 to 208,967 16379
Group Condition mRNA_8007 mRNA_8008 mRNA_8009 mRNA_8010 mRNA_8011
16375 16376 16377 16378 16379
facs on lipid accumulation Sorted Low BODIPY Gate +1.4 -2.8 N.D. -1.0 -1.8
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 -0.4 N.D. -1.7 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -1.8 N.D. -0.6 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.9 N.D. -0.9 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -1.9 N.D. +0.3 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.7 N.D. -1.4 +0.2
growth on ypd YPD +0.1 -1.3 N.D. +0.2 +0.5
growth on oleic acid YNB Glucose +0.4 -0.1 N.D. -0.4 -0.4
growth on oleic acid YNB Oleic Acid +0.7 -0.1 N.D. -1.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 N.D. +0.5 -0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.7 N.D. -0.7 +1.0
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.2 N.D. -0.1 -0.4
auxotrophy YNB Glucose +0.4 -0.1 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.1 N.D. -2.0 +1.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.8 N.D. -1.0 +2.0
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.3 N.D. +0.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.2 N.D. -1.1 +2.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. +1.4 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.8 N.D. +0.8 +0.3
auxotrophy Dropout Complete +0.8 +0.9 N.D. +0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +1.3 N.D. +0.6 +2.1
remove
mRNA_8007
plot
remove
mRNA_8008
plot
remove
mRNA_8009
remove
mRNA_8010
plot
remove
mRNA_8011
plot