Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16380 and 16381 are separated by 460 nucleotides16381 and 16382 are separated by 312 nucleotides16382 and 16383 are separated by 301 nucleotides16383 and 16384 are separated by 195 nucleotides mRNA_8012: 16380 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 209,272 to 211,609 16380 mRNA_8013: 16381 - SUPERFAMILY--SSF58113, at 212,070 to 213,325 16381 mRNA_8014: 16382 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 213,638 to 214,851 16382 mRNA_8015: 16383 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 215,153 to 216,105 16383 mRNA_8016: 16384 - K11968 ARIH1 ariadne-1, at 216,301 to 218,518 16384
Group Condition mRNA_8012 mRNA_8013 mRNA_8014 mRNA_8015 mRNA_8016
16380 16381 16382 16383 16384
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.5 +0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.9 +0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -1.1 +0.0 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 -0.0 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.6 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.7 +0.2 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.0 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 +0.1 -0.1 N.D.
growth on ypd YPD +0.2 +0.1 -0.0 -0.2 N.D.
growth on oleic acid YNB Glucose +0.5 +0.0 -0.0 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.4 -0.0 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.5 -0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.5 +0.1 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.1 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 -0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.8 +0.1 -0.2 N.D.
auxotrophy YNB Glucose +0.2 +0.4 +0.3 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.3 +0.1 +0.4 N.D.
auxotrophy Dropout Complete +0.2 +0.7 +0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +1.0 +0.3 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +2.8 -0.1 -0.0 N.D.
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