Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16385 and 16386 are separated by 911 nucleotides16386 and 16387 are separated by 1896 nucleotides16387 and 16388 are separated by 183 nucleotides16388 and 16389 are separated by 82 nucleotides mRNA_8017: 16385 - K11087 SNRPD1, SMD1 small nuclear ribonucleoprotein D1, at 218,888 to 219,506 16385 mRNA_8018: 16386 - Hypothetical Protein, at 220,418 to 221,008 16386 mRNA_8019: 16387 - Hypothetical Protein, at 222,905 to 224,449 16387 mRNA_8020: 16388 - K19841 STE50 protein STE50, at 224,633 to 227,369 16388 mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227,452 to 229,516 16389
Group Condition mRNA_8017 mRNA_8018 mRNA_8019 mRNA_8020 mRNA_8021
16385 16386 16387 16388 16389
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.4 -2.6 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 -0.1 -2.8 -0.4
auxotrophy YNB Glucose N.D. +0.3 -0.1 -2.8 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.8 -1.2 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.2 -1.0 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.1 -1.8 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 -0.1 -1.2 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.0 -1.3 +0.0
auxotrophy Dropout Complete N.D. -0.2 -0.0 -1.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.4 -0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 +0.2 -1.4 -0.1
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.6 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 -0.7 +0.6 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.0 -0.0 -0.1
growth on ypd YPD N.D. -0.1 +0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +1.1 -0.2 -0.7 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +1.2 -0.2 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.0 -0.3 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.0 +1.3 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.3 +1.0 +0.3
remove
mRNA_8017
plot
remove
mRNA_8018
plot
remove
mRNA_8019
remove
mRNA_8020
plot
remove
mRNA_8021
plot