Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16394 and 16395 are separated by 264 nucleotides16395 and 16396 are separated by 11 nucleotides16396 and 16397 are separated by 105 nucleotides16397 and 16398 are separated by 491 nucleotides mRNA_8026: 16394 - K03515 REV1 DNA repair protein REV1, at 239,573 to 243,561 16394 mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243,826 to 244,717 16395 mRNA_8028: 16396 - K06100 SYMPK symplekin, at 244,729 to 248,815 16396 mRNA_8029: 16397 - K02152 ATPeV1G, ATP6G V-type H+-transporting ATPase subunit G, at 248,921 to 249,552 16397 mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250,044 to 251,923 16398
Group Condition mRNA_8026 mRNA_8027 mRNA_8028 mRNA_8029 mRNA_8030
16394 16395 16396 16397 16398
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 N.D. N.D. -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.1 N.D. N.D. -1.8
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.0 N.D. N.D. -1.1
growth on ypd YPD -0.1 -0.2 N.D. N.D. -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.0 N.D. N.D. -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.7 N.D. N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 N.D. N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.0 N.D. N.D. -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.0 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 N.D. N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 N.D. N.D. -0.4
growth on oleic acid YNB Glucose +0.0 -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.2 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 N.D. N.D. +0.3
auxotrophy YNB Glucose +0.2 -0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.3 N.D. N.D. +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.4 N.D. N.D. +0.8
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 N.D. N.D. +0.5
auxotrophy Dropout Complete +0.4 -0.0 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 N.D. N.D. +0.8
growth on oleic acid YNB Oleic Acid +0.0 -0.0 N.D. N.D. +0.9
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