Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16396 and 16397 are separated by 105 nucleotides16397 and 16398 are separated by 491 nucleotides16398 and 16399 are separated by 283 nucleotides16399 and 16400 are separated by 592 nucleotides mRNA_8028: 16396 - K06100 SYMPK symplekin, at 244,729 to 248,815 16396 mRNA_8029: 16397 - K02152 ATPeV1G, ATP6G V-type H+-transporting ATPase subunit G, at 248,921 to 249,552 16397 mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250,044 to 251,923 16398 mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252,207 to 252,830 16399 mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253,423 to 257,120 16400
Group Condition mRNA_8028 mRNA_8029 mRNA_8030 mRNA_8031 mRNA_8032
16396 16397 16398 16399 16400
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -1.8 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -1.1 -0.7 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.7 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.0 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.6 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.4 +0.1 N.D.
growth on ypd YPD N.D. N.D. -0.5 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.4 +0.5 N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.5 -0.2 N.D.
auxotrophy Dropout Complete N.D. N.D. +0.4 -0.1 N.D.
auxotrophy YNB Glucose N.D. N.D. +0.3 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.3 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.0 +0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.5 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.6 +0.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.9 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.8 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.8 +0.8 N.D.
remove
mRNA_8028
plot		 remove
mRNA_8029
plot		 remove
mRNA_8030		 remove
mRNA_8031
plot		 remove
mRNA_8032
plot