Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16404 and 16405 are separated by 171 nucleotides16405 and 16406 are separated by 172 nucleotides16406 and 16407 are separated by 92 nucleotides16407 and 16408 are separated by 248 nucleotides mRNA_8036: 16404 - K01942 HLCS biotin--protein ligase, at 279,404 to 281,646 16404 mRNA_8037: 16405 - K14797 ENP1, BYSL essential nuclear protein 1, at 281,818 to 283,593 16405 mRNA_8038: 16406 - K05757 ARPC1A_B actin related protein 2/3 complex, subunit 1A/1B, at 283,766 to 285,253 16406 mRNA_8039: 16407 - HMMPfam-DASH complex subunit Dad3-PF08656, at 285,346 to 285,719 16407 mRNA_8040: 16408 - BLAST putative Structural constituent of cytoskeleton [Rhod..., at 285,968 to 287,416 16408
Group Condition mRNA_8036 mRNA_8037 mRNA_8038 mRNA_8039 mRNA_8040
16404 16405 16406 16407 16408
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 N.D. N.D. N.D. -1.3
auxotrophy YNB Glucose -1.2 N.D. N.D. N.D. -0.6
growth on ricinoleic acid YNB Glucose -1.3 N.D. N.D. N.D. -0.4
auxotrophy Dropout Complete -1.0 N.D. N.D. N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 N.D. N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 N.D. N.D. N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. N.D. -1.0
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. N.D. N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. N.D. N.D. -0.9
growth on oleic acid YNB Glucose -1.0 N.D. N.D. N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. N.D. -0.9
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. N.D. N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.7 N.D. N.D. N.D. -0.2
growth on ypd YPD +0.1 N.D. N.D. N.D. +0.5
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