Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16405 and 16406 are separated by 172 nucleotides16406 and 16407 are separated by 92 nucleotides16407 and 16408 are separated by 248 nucleotides16408 and 16409 are separated by 306 nucleotides mRNA_8037: 16405 - K14797 ENP1, BYSL essential nuclear protein 1, at 281,818 to 283,593 16405 mRNA_8038: 16406 - K05757 ARPC1A_B actin related protein 2/3 complex, subunit 1A/1B, at 283,766 to 285,253 16406 mRNA_8039: 16407 - HMMPfam-DASH complex subunit Dad3-PF08656, at 285,346 to 285,719 16407 mRNA_8040: 16408 - BLAST putative Structural constituent of cytoskeleton [Rhod..., at 285,968 to 287,416 16408 mRNA_8041: 16409 - K13350 PXMP4, PMP24 peroxisomal membrane protein 4, at 287,723 to 288,731 16409
Group Condition mRNA_8037 mRNA_8038 mRNA_8039 mRNA_8040 mRNA_8041
16405 16406 16407 16408 16409
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -1.0 -1.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. -0.9 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.9 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. -0.6 -1.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. -0.6 -1.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. -0.6 -0.6
auxotrophy YNB Glucose N.D. N.D. N.D. -0.6 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. -1.3 +0.5
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. -0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. -0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. +0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. -0.1 +0.1
growth on oleic acid YNB Glucose N.D. N.D. N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. -0.4 +0.4
auxotrophy Dropout Complete N.D. N.D. N.D. -0.4 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. -0.3 +0.4
growth on ypd YPD N.D. N.D. N.D. +0.5 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.2 +0.6
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