Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16406 and 16407 are separated by 92 nucleotides16407 and 16408 are separated by 248 nucleotides16408 and 16409 are separated by 306 nucleotides16409 and 16410 are separated by 236 nucleotides mRNA_8038: 16406 - K05757 ARPC1A_B actin related protein 2/3 complex, subunit 1A/1B, at 283,766 to 285,253 16406 mRNA_8039: 16407 - HMMPfam-DASH complex subunit Dad3-PF08656, at 285,346 to 285,719 16407 mRNA_8040: 16408 - BLAST putative Structural constituent of cytoskeleton [Rhod..., at 285,968 to 287,416 16408 mRNA_8041: 16409 - K13350 PXMP4, PMP24 peroxisomal membrane protein 4, at 287,723 to 288,731 16409 mRNA_8042: 16410 - K17408 DAP3, MRPS29 small subunit ribosomal protein S29, at 288,968 to 290,792 16410
Group Condition mRNA_8038 mRNA_8039 mRNA_8040 mRNA_8041 mRNA_8042
16406 16407 16408 16409 16410
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -1.0 -1.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.9 -1.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.9 -1.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.6 -1.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.6 -1.1 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.6 -0.6 N.D.
auxotrophy YNB Glucose N.D. N.D. -0.6 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.3 +0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.2 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.4 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.1 +0.1 N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.4 +0.4 N.D.
auxotrophy Dropout Complete N.D. N.D. -0.4 +0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.4 N.D.
growth on ypd YPD N.D. N.D. +0.5 -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.6 N.D.
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