Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16408 and 16409 are separated by 306 nucleotides16409 and 16410 are separated by 236 nucleotides16410 and 16411 are separated by 211 nucleotides16411 and 16412 are separated by 271 nucleotides mRNA_8040: 16408 - BLAST putative Structural constituent of cytoskeleton [Rhod..., at 285,968 to 287,416 16408 mRNA_8041: 16409 - K13350 PXMP4, PMP24 peroxisomal membrane protein 4, at 287,723 to 288,731 16409 mRNA_8042: 16410 - K17408 DAP3, MRPS29 small subunit ribosomal protein S29, at 288,968 to 290,792 16410 mRNA_8043: 16411 - K15283 SLC35E1 solute carrier family 35, member E1, at 291,004 to 293,289 16411 mRNA_8044: 16412 - KOG4520 Predicted coiled-coil protein, at 293,561 to 294,571 16412
Group Condition mRNA_8040 mRNA_8041 mRNA_8042 mRNA_8043 mRNA_8044
16408 16409 16410 16411 16412
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -1.3 N.D. +0.6 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +0.5 N.D. -0.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -1.2 N.D. +0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -1.1 N.D. +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -1.6 N.D. +1.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.6 N.D. +0.2 N.D.
auxotrophy YNB Glucose -0.6 -0.4 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.4 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -1.3 N.D. +1.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.4 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 N.D. +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.4 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 N.D. +0.1 N.D.
growth on ypd YPD +0.5 -0.1 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.6 N.D. +0.2 N.D.
auxotrophy Dropout Complete -0.4 +0.5 N.D. +0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.1 N.D. +0.8 N.D.
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