Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16410 and 16411 are separated by 211 nucleotides16411 and 16412 are separated by 271 nucleotides16412 and 16413 are separated by 334 nucleotides16413 and 16414 are separated by 302 nucleotides mRNA_8042: 16410 - K17408 DAP3, MRPS29 small subunit ribosomal protein S29, at 288,968 to 290,792 16410 mRNA_8043: 16411 - K15283 SLC35E1 solute carrier family 35, member E1, at 291,004 to 293,289 16411 mRNA_8044: 16412 - KOG4520 Predicted coiled-coil protein, at 293,561 to 294,571 16412 mRNA_8045: 16413 - Hypothetical Protein, at 294,906 to 295,366 16413 mRNA_8046: 16414 - BLAST myosin tail domain protein [Rhizoctonia solani AG-3 R..., at 295,669 to 297,549 16414
Group Condition mRNA_8042 mRNA_8043 mRNA_8044 mRNA_8045 mRNA_8046
16410 16411 16412 16413 16414
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.8 N.D. -0.5 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 N.D. +0.1 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 N.D. -0.1 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 N.D. +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 N.D. -0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 N.D. +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. +0.1 -0.3
growth on ypd YPD N.D. -0.1 N.D. -0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. +0.2 +0.1
growth on oleic acid YNB Glucose N.D. +0.4 N.D. +0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 N.D. +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 N.D. -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.6 N.D. -0.1 -0.0
auxotrophy YNB Glucose N.D. +0.3 N.D. +0.3 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.3 N.D. +0.1 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.8 N.D. +0.2 -0.3
auxotrophy Dropout Complete N.D. +0.5 N.D. +0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +1.4 N.D. -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.4 N.D. +0.3 -0.1
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