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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16412 and 16413 are separated by 334 nucleotides
16413 and 16414 are separated by 302 nucleotides
16414 and 16415 are separated by 113 nucleotides
16415 and 16416 are separated by 642 nucleotides
mRNA_8044: 16412 - KOG4520 Predicted coiled-coil protein, at 293,561 to 294,571
16412
mRNA_8045: 16413 - Hypothetical Protein, at 294,906 to 295,366
16413
mRNA_8046: 16414 - BLAST myosin tail domain protein [Rhizoctonia solani AG-3 R..., at 295,669 to 297,549
16414
mRNA_8047: 16415 - K08744 CRLS cardiolipin synthase (CMP-forming), at 297,663 to 298,822
16415
mRNA_8048: 16416 - Hypothetical Protein, at 299,465 to 299,980
16416
Group
Condition
mRNA
_8044
mRNA
_8045
mRNA
_8046
mRNA
_8047
mRNA
_8048
16412
16413
16414
16415
16416
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.5
+0.0
N.D.
-2.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
-0.4
N.D.
-1.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
-0.1
N.D.
-1.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-1.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.8
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
-0.3
N.D.
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
-0.5
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.0
N.D.
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.3
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-0.3
N.D.
-0.2
growth on oleic acid
YNB Glucose
N.D.
+0.2
-0.5
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.2
+0.1
N.D.
-0.4
growth on ypd
YPD
N.D.
-0.0
+0.1
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
-0.3
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.1
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose
N.D.
+0.3
-0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
-0.3
N.D.
+0.6
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.2
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
-0.1
N.D.
+0.6
auxotrophy
Dropout Complete
N.D.
+0.3
+0.0
N.D.
+0.4
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