Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16414 and 16415 are separated by 113 nucleotides16415 and 16416 are separated by 642 nucleotides16416 and 16417 are separated by 700 nucleotides16417 and 16418 are separated by 536 nucleotides mRNA_8046: 16414 - BLAST myosin tail domain protein [Rhizoctonia solani AG-3 R..., at 295,669 to 297,549 16414 mRNA_8047: 16415 - K08744 CRLS cardiolipin synthase (CMP-forming), at 297,663 to 298,822 16415 mRNA_8048: 16416 - Hypothetical Protein, at 299,465 to 299,980 16416 mRNA_8049: 16417 - SUPERFAMILY--SSF52047, at 300,681 to 303,799 16417 mRNA_8050: 16418 - K02943 RP-LP2, RPLP2 large subunit ribosomal protein LP2, at 304,336 to 304,986 16418
Group Condition mRNA_8046 mRNA_8047 mRNA_8048 mRNA_8049 mRNA_8050
16414 16415 16416 16417 16418
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -2.6 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.4 N.D. -1.4 -0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -1.7 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.1 N.D. -0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. -0.6 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. -0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 N.D. -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. -0.2 +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.2 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.4 -0.0 N.D.
growth on oleic acid YNB Glucose -0.5 N.D. -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.1 +0.2 N.D.
growth on ypd YPD +0.1 N.D. -0.3 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.4 -0.0 N.D.
auxotrophy YNB Glucose -0.1 N.D. +0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.1 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. +0.6 +0.2 N.D.
auxotrophy Dropout Complete +0.0 N.D. +0.4 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.6 +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.3 +0.3 N.D.
remove
mRNA_8046
plot		 remove
mRNA_8047
plot		 remove
mRNA_8048		 remove
mRNA_8049
plot		 remove
mRNA_8050
plot