Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16420 and 16421 are separated by 112 nucleotides16421 and 16422 are separated by 163 nucleotides16422 and 16423 are separated by 127 nucleotides16423 and 16424 are separated by 276 nucleotides mRNA_8052: 16420 - KOG2372 Oxidation resistance protein, at 307,058 to 308,931 16420 mRNA_8053: 16421 - K03037 PSMD6, RPN7 26S proteasome regulatory subunit N7, at 309,044 to 310,701 16421 mRNA_8054: 16422 - K03036 PSMD11, RPN6 26S proteasome regulatory subunit N6, at 310,865 to 312,762 16422 mRNA_8055: 16423 - K06173 truA, PUS1 tRNA pseudouridine38-40 synthase, at 312,890 to 314,981 16423 mRNA_8056: 16424 - Hypothetical Protein, at 315,258 to 318,661 16424
Group Condition mRNA_8052 mRNA_8053 mRNA_8054 mRNA_8055 mRNA_8056
16420 16421 16422 16423 16424
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. N.D. N.D. N.D.
growth on oleic acid YNB Glucose -0.0 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. N.D. N.D. N.D.
growth on ypd YPD +0.0 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. N.D. N.D.
auxotrophy YNB Glucose +0.1 N.D. N.D. N.D. N.D.
auxotrophy Dropout Complete +0.2 N.D. N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. N.D. N.D. N.D.
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