Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16424 and 16425 are separated by 979 nucleotides16425 and 16426 are separated by 22 nucleotides16426 and 16427 are separated by 580 nucleotides16427 and 16428 are separated by 715 nucleotides mRNA_8056: 16424 - Hypothetical Protein, at 315,258 to 318,661 16424 mRNA_8057: 16425 - K08866 TTK, MPS1 serine/threonine-protein kinase TTK/MPS1, at 319,641 to 320,716 16425 mRNA_8058: 16426 - Hypothetical Protein, at 320,739 to 323,524 16426 mRNA_8059: 16427 - HMMPfam-Translation initiation factor IF-3, C-terminal domain-PF00707,HMMPfam-Translation initiation factor IF-3, N-terminal domain-PF05198,SUPERFAMILY--SSF54364,SUPERFAMILY--SSF55200, at 324,105 to 324,902 16427 mRNA_8060: 16428 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 325,618 to 328,246 16428
Group Condition mRNA_8056 mRNA_8057 mRNA_8058 mRNA_8059 mRNA_8060
16424 16425 16426 16427 16428
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. N.D. -1.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. -0.5
growth on ypd YPD N.D. N.D. N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose N.D. N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. N.D. -0.1
auxotrophy Dropout Complete N.D. N.D. N.D. N.D. -0.1
growth on oleic acid YNB Glucose N.D. N.D. N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. N.D. +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. N.D. +0.5
remove
mRNA_8056
plot		 remove
mRNA_8057
plot		 remove
mRNA_8058		 remove
mRNA_8059
plot		 remove
mRNA_8060
plot