Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16428 and 16429 are separated by 868 nucleotides16429 and 16430 are separated by 152 nucleotides16430 and 16431 are separated by 507 nucleotides16431 and 16432 are separated by 296 nucleotides mRNA_8060: 16428 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 325,618 to 328,246 16428 mRNA_8061: 16429 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 329,115 to 329,494 16429 mRNA_8062: 16430 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 329,647 to 331,079 16430 mRNA_8063: 16431 - HMMPfam-Protein of unknown function (DUF3500)-PF12006, at 331,587 to 333,110 16431 mRNA_8064: 16432 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 333,407 to 335,918 16432
Group Condition mRNA_8060 mRNA_8061 mRNA_8062 mRNA_8063 mRNA_8064
16428 16429 16430 16431 16432
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.4 -0.8 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 N.D. -0.2 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. +0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. -0.1 -0.3 -0.0
growth on ypd YPD -0.2 N.D. -0.5 +0.2 +0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.6 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.0 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.0 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.4 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.2 -0.0 +0.1
growth on oleic acid YNB Glucose -0.0 N.D. -0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.0 +0.2 -0.2
auxotrophy YNB Glucose -0.1 N.D. -0.0 +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.0 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.1 +0.0 +0.1
auxotrophy Dropout Complete -0.1 N.D. +0.0 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.1 +0.2 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.0 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. -0.5 +0.2 +0.3
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.1 +0.3 +0.2
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