Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16433 and 16434 are separated by 685 nucleotides16434 and 16435 are separated by 711 nucleotides16435 and 16436 are separated by 257 nucleotides16436 and 16437 are separated by 238 nucleotides mRNA_8065: 16433 - KOG0732 AAA+-type ATPase containing the bromodomain, at 336,013 to 341,106 16433 mRNA_8066: 16434 - K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18, at 341,792 to 345,856 16434 mRNA_8067: 16435 - K12399 AP3S AP-3 complex subunit sigma, at 346,568 to 347,476 16435 mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347,734 to 349,027 16436 mRNA_8069: 16437 - K11240 MSG5 tyrosine-protein phosphatase MSG5, at 349,266 to 352,237 16437
Group Condition mRNA_8065 mRNA_8066 mRNA_8067 mRNA_8068 mRNA_8069
16433 16434 16435 16436 16437
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -2.7 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -1.2 -0.5 +1.0
growth on ypd YPD N.D. N.D. -0.4 -0.0 +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.3 -0.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.9 -0.3 +1.0
growth on oleic acid YNB Glucose N.D. N.D. -0.3 -0.3 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.2 -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.3 -0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.6 -0.5 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.0 +0.0 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 +0.1 +0.3
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.2 -0.3 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.6 +0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 +0.1 +0.5
auxotrophy YNB Glucose N.D. N.D. +0.5 -0.3 +0.6
auxotrophy Dropout Complete N.D. N.D. +1.0 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.5 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.7 +0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +1.0 -0.3 +0.4
remove
mRNA_8065
plot
remove
mRNA_8066
plot
remove
mRNA_8067
remove
mRNA_8068
plot
remove
mRNA_8069
plot