Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16447 and 16448 are separated by 168 nucleotides16448 and 16449 are separated by 175 nucleotides16449 and 16450 are separated by 477 nucleotides16450 and 16451 are separated by 197 nucleotides mRNA_8079: 16447 - BLAST PRMT5-domain-containing protein [Sanghuangporus baumii], at 372,456 to 373,383 16447 mRNA_8080: 16448 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 373,552 to 376,166 16448 mRNA_8081: 16449 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 376,342 to 377,975 16449 mRNA_8082: 16450 - BLAST zinc-binding oxidoreductase [Moesziomyces antarcticus..., at 378,453 to 379,519 16450 mRNA_8083: 16451 - K17774 MDM10 mitochondrial distribution and morphology protein 10, at 379,717 to 381,351 16451
Group Condition mRNA_8079 mRNA_8080 mRNA_8081 mRNA_8082 mRNA_8083
16447 16448 16449 16450 16451
growth on oleic acid YNB Oleic Acid +0.1 -0.3 -1.9 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 -1.8 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 -1.6 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 -1.0 N.D. N.D.
growth on oleic acid YNB Glucose +0.5 -0.2 -1.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -0.7 N.D. N.D.
auxotrophy YNB Glucose +0.1 -0.4 -0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.4 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.6 N.D. N.D.
auxotrophy Dropout Complete +0.1 +0.1 -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -0.0 N.D. N.D.
growth on ypd YPD -0.1 +0.5 -0.5 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 +0.5 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.1 +0.9 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 +0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.6 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 +0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.3 +1.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +1.2 N.D. N.D.
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