Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16458 and 16459 are separated by 129 nucleotides16459 and 16460 are separated by 435 nucleotides16460 and 16461 are separated by 381 nucleotides16461 and 16462 are separated by 190 nucleotides mRNA_8090: 16458 - K12737 SDCCAG10 peptidyl-prolyl cis-trans isomerase SDCCAG10, at 395,084 to 397,372 16458 mRNA_8091: 16459 - K15463 RIT1 tRNA A64-2'-O-ribosylphosphate transferase, at 397,502 to 399,447 16459 mRNA_8092: 16460 - K14457 MOGAT2, MGAT2 2-acylglycerol O-acyltransferase 2, at 399,883 to 401,738 16460 mRNA_8093: 16461 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 402,120 to 403,069 16461 mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403,260 to 405,803 16462
Group Condition mRNA_8090 mRNA_8091 mRNA_8092 mRNA_8093 mRNA_8094
16458 16459 16460 16461 16462
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 -1.6 -0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 -0.8 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.4 -1.3 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 +0.1 -1.0 +0.5
auxotrophy YNB Glucose +0.1 -0.7 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 -0.2 +0.1 -0.1
growth on oleic acid YNB Glucose +0.3 -0.2 -0.3 -0.2 -0.3
growth on ricinoleic acid YNB Glucose +0.1 -0.5 +0.1 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.1 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 -0.3 -0.6 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.6 +0.3 +0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -0.0 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.4 +0.1 +0.1 -0.2
growth on ypd YPD -0.1 +0.3 -0.2 +0.4 -0.4
auxotrophy Dropout Complete +0.2 -0.3 +0.1 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.8 -0.2 +0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 -0.0 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 +0.1 +0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.2 +0.1 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.9 +0.8 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 +2.3 +0.2 -0.4
remove
mRNA_8090
plot
remove
mRNA_8091
plot
remove
mRNA_8092
remove
mRNA_8093
plot
remove
mRNA_8094
plot