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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16458 and 16459 are separated by 129 nucleotides
16459 and 16460 are separated by 435 nucleotides
16460 and 16461 are separated by 381 nucleotides
16461 and 16462 are separated by 190 nucleotides
mRNA_8090: 16458 - K12737 SDCCAG10 peptidyl-prolyl cis-trans isomerase SDCCAG10, at 395,084 to 397,372
16458
mRNA_8091: 16459 - K15463 RIT1 tRNA A64-2'-O-ribosylphosphate transferase, at 397,502 to 399,447
16459
mRNA_8092: 16460 - K14457 MOGAT2, MGAT2 2-acylglycerol O-acyltransferase 2, at 399,883 to 401,738
16460
mRNA_8093: 16461 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 402,120 to 403,069
16461
mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403,260 to 405,803
16462
Group
Condition
mRNA
_8090
mRNA
_8091
mRNA
_8092
mRNA
_8093
mRNA
_8094
16458
16459
16460
16461
16462
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.1
-1.6
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
-0.8
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.4
-1.3
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.1
+0.1
-1.0
+0.5
auxotrophy
YNB Glucose
+0.1
-0.7
-0.0
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.2
+0.1
-0.1
growth on oleic acid
YNB Glucose
+0.3
-0.2
-0.3
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
-0.5
+0.1
+0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
-0.1
+0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.3
-0.6
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.6
+0.3
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
-0.0
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.4
+0.1
+0.1
-0.2
growth on ypd
YPD
-0.1
+0.3
-0.2
+0.4
-0.4
auxotrophy
Dropout Complete
+0.2
-0.3
+0.1
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.8
-0.2
+0.5
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.1
-0.0
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.4
+0.1
+0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.2
+0.1
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.9
+0.8
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.1
+2.3
+0.2
-0.4
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