Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16461 and 16462 are separated by 190 nucleotides16462 and 16463 are separated by 507 nucleotides16463 and 16464 are separated by 467 nucleotides16464 and 16465 are separated by 333 nucleotides mRNA_8093: 16461 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 402,120 to 403,069 16461 mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403,260 to 405,803 16462 mRNA_8095: 16463 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 406,311 to 408,343 16463 mRNA_8096: 16464 - K13338 PEX1 peroxin-1, at 408,811 to 412,943 16464 mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413,277 to 414,722 16465
Group Condition mRNA_8093 mRNA_8094 mRNA_8095 mRNA_8096 mRNA_8097
16461 16462 16463 16464 16465
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.5 -0.4 N.D. -1.9
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 -0.8 N.D. -0.5
auxotrophy YNB Glucose -0.1 -0.1 -0.3 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.3 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 +0.2 N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.2 +0.2 N.D. -0.0
auxotrophy Dropout Complete +0.5 -0.0 -0.3 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.2 -0.1 +0.0 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.2 N.D. +0.0
growth on oleic acid YNB Glucose -0.2 -0.3 +0.3 N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.1 N.D. +0.4
growth on ypd YPD +0.4 -0.4 +0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.4 +0.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 +0.2 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.3 +0.0 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.4 +1.2 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.2 +0.3 N.D. +0.3
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