Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16462 and 16463 are separated by 507 nucleotides16463 and 16464 are separated by 467 nucleotides16464 and 16465 are separated by 333 nucleotides16465 and 16466 are separated by 494 nucleotides mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403,260 to 405,803 16462 mRNA_8095: 16463 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 406,311 to 408,343 16463 mRNA_8096: 16464 - K13338 PEX1 peroxin-1, at 408,811 to 412,943 16464 mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413,277 to 414,722 16465 mRNA_8098: 16466 - Hypothetical Protein, at 415,217 to 416,223 16466
Group Condition mRNA_8094 mRNA_8095 mRNA_8096 mRNA_8097 mRNA_8098
16462 16463 16464 16465 16466
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.4 N.D. -1.9 -0.4
auxotrophy YNB Glucose -0.1 -0.3 N.D. -0.7 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.8 N.D. -0.5 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 N.D. -0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 N.D. -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 N.D. -0.2 +0.2
auxotrophy Dropout Complete -0.0 -0.3 N.D. -0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.0 N.D. +0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.2 +0.2 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 N.D. +0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 N.D. +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.2 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.1 N.D. +0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.0 N.D. -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 N.D. +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 N.D. +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 N.D. -0.3 +0.5
growth on oleic acid YNB Glucose -0.3 +0.3 N.D. +0.4 +0.3
growth on ypd YPD -0.4 +0.4 N.D. +0.0 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +1.2 N.D. +0.0 +0.1
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