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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16464 and 16465 are separated by 333 nucleotides
16465 and 16466 are separated by 494 nucleotides
16466 and 16467 are separated by 664 nucleotides
16467 and 16468 are separated by 903 nucleotides
mRNA_8096: 16464 - K13338 PEX1 peroxin-1, at 408,811 to 412,943
16464
mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413,277 to 414,722
16465
mRNA_8098: 16466 - Hypothetical Protein, at 415,217 to 416,223
16466
mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416,888 to 417,757
16467
mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418,661 to 419,532
16468
Group
Condition
mRNA
_8096
mRNA
_8097
mRNA
_8098
mRNA
_8099
mRNA
_8100
16464
16465
16466
16467
16468
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.9
-0.4
-0.6
-1.7
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.6
+0.1
-0.5
-0.6
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.1
-0.8
-0.6
auxotrophy
YNB Glucose
N.D.
-0.7
+0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
-0.3
-0.9
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
+0.2
-0.7
-0.1
auxotrophy
Dropout Complete
N.D.
-0.1
+0.3
-0.7
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.2
+0.2
-0.8
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
+0.2
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.0
+0.1
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.0
+0.1
-0.2
-0.1
growth on ypd
YPD
N.D.
+0.0
+0.7
-1.8
+1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
+0.1
+0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.2
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
-0.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.0
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.2
+0.3
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.3
+0.5
+0.3
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
+0.0
+0.6
+0.3
growth on oleic acid
YNB Glucose
N.D.
+0.4
+0.3
+0.6
-0.2
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