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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16465 and 16466 are separated by 494 nucleotides
16466 and 16467 are separated by 664 nucleotides
16467 and 16468 are separated by 903 nucleotides
16468 and 16469 are separated by 311 nucleotides
mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413,277 to 414,722
16465
mRNA_8098: 16466 - Hypothetical Protein, at 415,217 to 416,223
16466
mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416,888 to 417,757
16467
mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418,661 to 419,532
16468
mRNA_8101: 16469 - Hypothetical Protein, at 419,844 to 420,309
16469
Group
Condition
mRNA
_8097
mRNA
_8098
mRNA
_8099
mRNA
_8100
mRNA
_8101
16465
16466
16467
16468
16469
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
-0.4
-0.6
-1.7
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.2
-0.7
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.6
+0.1
-0.5
-0.6
+0.1
auxotrophy
YNB Glucose
-0.7
+0.1
-0.2
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.8
-0.3
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
-0.8
-0.6
+0.4
auxotrophy
Dropout Complete
-0.1
+0.3
-0.7
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
-0.9
+0.2
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.1
+0.0
-0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
+0.1
+0.2
-0.4
-0.2
growth on ypd
YPD
+0.0
+0.7
-1.8
+1.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.1
-0.2
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.2
-0.2
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.2
+0.4
-0.4
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.0
-0.1
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.2
+0.3
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.5
+0.3
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.1
-0.2
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.0
-0.1
+0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
+0.6
+0.3
-0.1
growth on oleic acid
YNB Glucose
+0.4
+0.3
+0.6
-0.2
-0.2
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